Publications – Group M. Nguyen Chi
Recent publications
Leiba J, Sipka T, Begon-Pescia C, Bernardello M, Tairi S, Bossi L, Gonzalez AA, Mialhe X, Gualda E, Loza-Alvarez P, Blanc-Potard A, Lutfalla G, Nguyen-Chi M (2024) Dynamics of macrophage polarization support Salmonella persistence in a whole living organism. Elife 13:e89828. doi:10.7554/eLife.89828
Resseguier J, Nguyen-Chi M, Wohlmann J, Rigaudeau D, Salinas I, Oehlers SH, Wiegertjes GF, Johansen FE, Qiao SW, Koppang EO, Verrier B, Boudinot P, Griffiths G (2023) Identification of a pharyngeal mucosal lymphoid organ in zebrafish and other teleosts: Tonsils in fish? Sci Adv 9:eadj0101. doi:10.1126/sciadv.adj0101
Park SA, Sipka T, Kriva Z, Lutfalla G, Nguyen-Chi M, Mikula K (2023) Segmentation-based tracking of macrophages in 2D+time microscopy movies inside a living animal. Comput Biol Med 153, 106499. doi:10.1016/j.compbiomed.2022.106499
Leiba J, Ozbilgic R, Hernandez L, Demou M, Lutfalla G, Yatime L, Nguyen Chi M (2023) Molecular actors of inflammation and their signaling pathways: mechanistic insights from zebrafish. Biology 12, 153. doi: 10.3390/biology12020153
Sipka T, Park SA, Ozbilgic R, Balas L, Durand T, Mikula K, Lutfalla G, Nguyen-Chi M (2022) Macrophages undergo a behavioural switch during wound healing in zebrafish. Free Rad Biol Med 192:200–212. doi:10.1016/j.freeradbiomed.2022.09.021
Charmantier G, Nguyen-Chi M, Lutfalla G (2022) Ontogenetic Changes in Blood Osmolality During the Postembryonic Development of Zebrafish (Danio rerio). Zebrafish 19:1-6. doi:10.1089/zeb.2021.0075
Begon-Pescia C, Boireau S, Boyer-Clavel M, Lutfalla G, Nguyen-Chi M (2022) Preparing sequencing grade RNAs from a small number of FACS-sorted larvae macrophages isolated from enzyme free dissociated zebrafish larvae. MethodsX 9, 101651. doi:10.1016/j.mex.2022.101651
Sipka T, Peroceschi R, Hassan-Abdi R, Groß M, Ellett F, Begon-Pescia C, Gonzalez C, Lutfalla G, Nguyen-Chi M (2021) Damage-Induced Calcium Signaling and Reactive Oxygen Species Mediate Macrophage Activation in Zebrafish. Front Immunol 12:636585. doi:10.3389/fimmu.2021.636585
Laplace-Builhé B, Barthelaix A, Assou S, Bohaud C, Pratlong M, Severac D, Tejedor G, Luz-Crawford P, Nguyen-Chi M, Mathieu M, Jorgensen C, Djouad F (2021) NRG1/ErbB signalling controls the dialogue between macrophages and neural crest-derived cells during zebrafish fin regeneration. Nat Commun 12:6336. doi:10.1038/s41467-021-26422-5
Jacobs S, Dóró E, Hammond FR, Scheer M, Nguyen-Chi M, Lutfalla L, Wiegertjes G, Forlenza M (2021) Occurrence of foamy macrophages during the innate response of zebrafish to trypanosome infections. eLife 10:e64520. doi:10.7554/eLife.64520
Travnickova J, Nhim S, Abdellaoui N, Djouad F, Nguyen-Chi M, Parmeggiani A, Kissa K (2021) Macrophage morphological plasticity and migration is Rac signalling and MMP9 dependant. Sci Rep 11, 10123. doi:10.1038/s41598-021-88961-7
Moussouni M, Berry L, Sipka T, Nguyen-Chi M, Blanc-Potard AB (2021) Pseudomonas aeruginosa OprF plays a role in resistance to macrophage clearance during acute infection. Sci Rep 11, 359. doi: 0.1038/s41598-020-79678-0
Nguyen‐Chi M, Luz‐Crawford P, Balas L, Sipka T, Contreras‐López R, Barthelaix A, Lutfalla G, Durand T, Jorgensen C, Djouad F (2020) Pro‐resolving mediator protectin D1 promotes epimorphic regeneration by controlling immune cell function in vertebrates. Br J Pharmacol 177, 4055–4073. doi:10.1111/bph.15156
Park SA, Sipka T, Krivá Z, Ambroz M, Kollár M, Kósa B, Nguyen-Chi M, Lutfalla G, Mikula K (2020) Macrophage Image Segmentation by Thresholding and Subjective Surface Method. Tatra Mt Math Publ 75, 103–120. doi:10.2478/tmmp-2020-0007
Travnickova J, Nhim S, Abdellaoui N, Djouad F, Nguyen-Chi M, Parmeggiani A, Kissa K. (2019) Macrophage plasticity is Rac signalling and MMP9 dependant. Preprint BioRxiv. doi:10.1101/614388
Phan QT, Sipka T, Gonzalez C, Levraud JP, Lutfalla G, Nguyen-Chi M (2018) Neutrophils use superoxide to control bacterial infection at a distance. PLoS Pathog 14:e1007157. doi:10.1371/journal.ppat.1007157
Nguyen-Chi M, Laplace-Builhé B, Travnickova J, Luz-Crawford P, Tejedor G, Lutfalla G, Kissa K, Jorgensen C, Djouad F (2017). TNF signaling and macrophages govern fin regeneration in zebrafish larvae. Cell Death Dis 8:e2979. doi:10.1038/cddis.2017.374
Bernut A, Nguyen-Chi M, Halloum I, Herrmann JL, Lutfalla G, Kremer L (2016) Mycobacterium abscessus-Induced Granuloma Formation Is Strictly Dependent on TNF Signaling and Neutrophil Trafficking. PLoS Pathog 12: e1005986. doi:10.1371/journal.ppat.1005986
Faure E, Campana M, Cunderlik R, Drblikova O, Duloquin L, Keller R, Lombardot B, Melani C, Remesikova M, Rizzi B, Savy T, Recher G, Zanella C, Kollar J, Villoutreix P, Delile J, Affaticati P, Maury, B, Colin I, Desnoulez S, Nief JY, Calvat P, Lutfalla G, Suret P, Doursat R, Sarti A, Mikula K, Peyriéras N, Bourgine P (2016) A workflow to process 3D+time images of developing organisms and reconstruct their cell lineage. Nat Commun 7:8674. doi:10.1038/ncomms9674
Nguyen-Chi M, Laplace-Builhe B, Jorgensen C, Djouad F (2016) Deciphering the complexity of macrophage biology and function with the zebrafish model. Macrophage 3:e1260. doi:10.14800/Macrophage.1260
Nguyen-Chi M, Laplace-Builhe B, Travnickova J, Luz-Crawford P, Tejedor G, Phan QT, Duroux-Richard I, Levraud JP, Kissa K, Lutfalla G, Jorgensen C, Djouad F (2015) Identification of polarized macrophage subsets in zebrafish. eLife 4:e07288. doi:10.7554/eLife.07288
Nguyen-Chi M, Phan QT, Gonzalez C, Dubremetz JF, Levraud JP, et al. (2014) Transient infection of the zebrafish notochord with E. coli induces chronic inflammation. Dis Model Mech 7:871-882. doi:10.1242/dmm.014498